1、Li Y & Huang Q (2013) Influence of Protein Self-Association on Complex Coacervation with Polysaccharide: A Monte Carlo Study. J. Phys. Chem. B 117:2615-2624.
2、Li Y, Shi T, Huang Q, & An L "Monte Carlo simulation on complex and complex coacervation of protein and polysaccharide." J. Phys. Chem. B, 2012, 116:3045-3053 (front cover).
3、Li Y, Li J, Xia Q, Zhang B, Wang Q, & Huang Q "Understanding the Dissolution of α-Zein in Aqueous Ethanol and Acetic Acid Solutions." J. Phys. Chem. B, 2012, 116:12057-12064.
4、Li Y & Fang J "PROTS-RF: A Robust Model for Predicting Mutation-Induced Protein Stability Changes." PLoS One, 2012, 7:e47247.
5、Fang J, Li Y, & Middaugh CR (2012) METHODS AND SYSTEMS FOR DESIGNING STABLE PROTEINS US Patent 20120265513
6、Li Y, Fang Y, & Fang J "Predicting residue-residue contacts using random forest models." Bioinformatics, 2011, 27:3379-3384.
7、Li Y, Middaugh CR, & Fang J (2010) A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants. BMC Bioinformatics 11:62.(Highly Accessed)
8、Li Y & Zhang Y "REMO: A new protocol to refine full atomic protein models from C-alpha traces by optimizing hydrogen-bonding networks." Proteins: Structure, Function, and Bioinformatics, 2009, 76:665-676.
9、Li Y, Lee J, Lal J, An L, & Huang Q "Effects of pH on the Interactions and Conformation of Bovine Serum Albumin: Comparison between Chemical Force Microscopy and Small-Angle Neutron Scattering." J. Phys. Chem. B, 2008, 112:3797-3806.
10、Li Y, Shi T, Sun Z, An L, & Huang Q "Investigation of sol-gel transition in pluronic F127/D2O solutions using a combination of small-angle neutron scattering and Monte Carlo simulation." J. Phys. Chem. B, 2006, 110:26424-26429.
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